| 2003 Jayhawk Conference Baseball Standings | ||||||||||||
| Eastern Division | Con | All | Western Division | Con | All | |||||||
| Neosho County | 26 | 10 | 42 | 15 | Seward County | 26 | 6 | 45 | 16 | |||
| Cowley County | 24 | 12 | 35 | 19 | Hutchinson | 22 | 10 | 37 | 21 | |||
| Fort Scott | 23 | 13 | 25 | 26 | Barton County | 20 | 12 | 32 | 22 | |||
| Labette | 20 | 16 | 27 | 19 | Butler County | 16 | 16 | 26 | 26 | |||
| Independence | 19 | 17 | 27 | 26 | Cloud County | 16 | 16 | 28 | 23 | |||
| Johnson County | 17 | 19 | 26 | 24 | Garden City | 14 | 18 | 30 | 28 | |||
| Highland | 16 | 20 | 20 | 28 | Pratt | 12 | 20 | 22 | 27 | |||
| Kansas City, Ks | 13 | 23 | 27 | 29 | Colby | 11 | 21 | 19 | 36 | |||
| Allen County | 12 | 24 | 20 | 32 | Dodge City | 6 | 26 | 9 | 43 | |||
| Coffeyville | 10 | 26 | 16 | 31 | ||||||||
| Brown Mackie | 10 | 21 | ||||||||||
| Hesston | 4 | 27 | ||||||||||
| Division Champion | ||||||||||||